BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB009G11LP1|AL426100
(821 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1542 1620 0.0
>3x_Contig1542
Length = 13810
Score = 1620 bits (817), Expect = 0.0
Identities = 820/821 (99%)
Strand = Plus / Minus
Query: 1 ccaatgatgttaagttgatggccttaggtgatcctcagatcaaaggtatctgggcaaata 60
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 13667 ccaatgatgttaagttgatgcccttaggtgatcctcagatcaaaggtatctgggcaaata 13608
Query: 61 ctccatatatctcaagacttgatacgtttggaaacgattactacctaggtcatattttcc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13607 ctccatatatctcaagacttgatacgtttggaaacgattactacctaggtcatattttcc 13548
Query: 121 gtaccatgtacaatcggttgaagccttcgcacgttgttgttatgggtgatctgttctctt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13547 gtaccatgtacaatcggttgaagccttcgcacgttgttgttatgggtgatctgttctctt 13488
Query: 181 cgcaatggatcggagattctgagttcttcaatcggaccgttcggtacacaaaaagactat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13487 cgcaatggatcggagattctgagttcttcaatcggaccgttcggtacacaaaaagactat 13428
Query: 241 ttaatagagatgtaaagtggttgtatgacctacaagaagaacatcacggagacgatggta 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13427 ttaatagagatgtaaagtggttgtatgacctacaagaagaacatcacggagacgatggta 13368
Query: 301 cttacaaggtaaattgggtcgaatgggctgataatctgaacaaaatcagaaccggcgatc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13367 cttacaaggtaaattgggtcgaatgggctgataatctgaacaaaatcagaaccggcgatc 13308
Query: 361 gtcccatgaattttagtttcggttatcaagatatctacaattggacttcagccgaaaact 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13307 gtcccatgaattttagtttcggttatcaagatatctacaattggacttcagccgaaaact 13248
Query: 421 atttgttcatcaatgtttctggaaaccacgatattggctactctggagatgccacttatc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13247 atttgttcatcaatgtttctggaaaccacgatattggctactctggagatgccacttatc 13188
Query: 481 aacacatggcaagatatcgcgaactcttgggaaaagataattattggattgaatataatg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13187 aacacatggcaagatatcgcgaactcttgggaaaagataattattggattgaatataatg 13128
Query: 541 ctggcaccgataatgcatggaggataattgttttgaacgatttattattagaaggacctg 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13127 ctggcaccgataatgcatggaggataattgttttgaacgatttattattagaaggacctg 13068
Query: 601 cactacaaccagaattacttgaaaccaattgggaatttttataccaattatttgaaagga 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13067 cactacaaccagaattacttgaaaccaattgggaatttttataccaattatttgaaagga 13008
Query: 661 aattcgaaggtagtacggtattgctcactcacataccattttataagccatctggactgt 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13007 aattcgaaggtagtacggtattgctcactcacataccattttataagccatctggactgt 12948
Query: 721 gttacgatggcccagaattcagatactacccagaagattaccagagagagccttacaagt 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12947 gttacgatggcccagaattcagatactacccagaagattaccagagagagccttacaagt 12888
Query: 781 ccaagctattgagatcacaaaaccatttgagtgctgaagct 821
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 12887 ccaagctattgagatcacaaaaccatttgagtgctgaagct 12847
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5652
Number of Sequences: 1807
Number of extensions: 5652
Number of successful extensions: 26
Number of sequences better than 1.0e-20: 1
length of query: 821
length of database: 10,358,551
effective HSP length: 16
effective length of query: 805
effective length of database: 10,329,639
effective search space: 8315359395
effective search space used: 8315359395
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)